Cluster: DianaHT_2018_SRR6795027_bin.13_CGC42
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.13
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795027_bin.13_k141_12505 | DianaHT_2018_SRR6795027_bin.13_k141_12505_1 | 1 | 540 | + | 9.B.146.1.3 |
| pfam | DianaHT_2018_SRR6795027_bin.13_k141_12505 | DianaHT_2018_SRR6795027_bin.13_k141_12505_2 | 544 | 1878 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | DianaHT_2018_SRR6795027_bin.13_k141_12505 | DianaHT_2018_SRR6795027_bin.13_k141_12505_3 | 1888 | 3132 | + | 2.A.103.1.3 |
| CAZyme | DianaHT_2018_SRR6795027_bin.13_k141_12505 | DianaHT_2018_SRR6795027_bin.13_k141_12505_4 | 3204 | 4334 | + | GT28 |
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_12505_1
Type: TC
Location: 1 - 540 (+)
Type: TC
Location: 1 - 540 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_12505_2
Type: pfam
Location: 544 - 1878 (+)
Type: pfam
Location: 544 - 1878 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_12505_3
Type: TC
Location: 1888 - 3132 (+)
Type: TC
Location: 1888 - 3132 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_12505_4
Type: CAZyme
Location: 3204 - 4334 (+)
Type: CAZyme
Location: 3204 - 4334 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
CABUKU01
Species
CABUKU01 sp902492205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.13_k141_12505_2 | omnivore > vegan | 1.38676 | 0.03964 |