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Cluster: DianaHT_2018_SRR6795027_bin.13_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC DianaHT_2018_SRR6795027_bin.13_k141_567 DianaHT_2018_SRR6795027_bin.13_k141_567_1 2 1609 + 1.B.14.6.1
TC DianaHT_2018_SRR6795027_bin.13_k141_567 DianaHT_2018_SRR6795027_bin.13_k141_567_2 1625 3145 + 8.A.46.1.4
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_567 DianaHT_2018_SRR6795027_bin.13_k141_567_3 3145 4659 + GH30_3
pfam DianaHT_2018_SRR6795027_bin.13_k141_567 DianaHT_2018_SRR6795027_bin.13_k141_567_4 4689 6722 + DUF5016 | DUF5125 | DUF5125 | DUF5121 | DUF5121
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_567 DianaHT_2018_SRR6795027_bin.13_k141_567_5 6932 9166 + GH3
peptidase DianaHT_2018_SRR6795027_bin.13_k141_567 DianaHT_2018_SRR6795027_bin.13_k141_567_6 9235 10236 - M28.UPA
TC DianaHT_2018_SRR6795027_bin.13_k141_567 DianaHT_2018_SRR6795027_bin.13_k141_567_7 10335 11591 + 1.A.23.4.5
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_567_1
Type: TC
Location: 2 - 1609 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_567_2
Type: TC
Location: 1625 - 3145 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_567_3
Type: CAZyme
Location: 3145 - 4659 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_567_4
Type: pfam
Location: 4689 - 6722 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_567_5
Type: CAZyme
Location: 6932 - 9166 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_567_6
Type: peptidase
Location: 9235 - 10236 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_567_7
Type: TC
Location: 10335 - 11591 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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