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Cluster: DianaHT_2018_SRR6795027_bin.13_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_12451 DianaHT_2018_SRR6795027_bin.13_k141_12451_3 1222 2028 - CE1
TC DianaHT_2018_SRR6795027_bin.13_k141_12451 DianaHT_2018_SRR6795027_bin.13_k141_12451_4 2188 4587 + 2.A.21.9.2
TC DianaHT_2018_SRR6795027_bin.13_k141_12451 DianaHT_2018_SRR6795027_bin.13_k141_12451_5 4592 6952 + 1.B.14.6.5
TC DianaHT_2018_SRR6795027_bin.13_k141_12451 DianaHT_2018_SRR6795027_bin.13_k141_12451_6 7062 8354 + 9.A.40.2.2
pfam DianaHT_2018_SRR6795027_bin.13_k141_12451 DianaHT_2018_SRR6795027_bin.13_k141_12451_7 8382 8876 + NlpE
pfam DianaHT_2018_SRR6795027_bin.13_k141_12451 DianaHT_2018_SRR6795027_bin.13_k141_12451_8 9064 10989 + DUF4114 | DUF4842
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_12451 DianaHT_2018_SRR6795027_bin.13_k141_12451_9 11444 14038 + GH2
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_12451_3
Type: CAZyme
Location: 1222 - 2028 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_12451_4
Type: TC
Location: 2188 - 4587 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_12451_5
Type: TC
Location: 4592 - 6952 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_12451_6
Type: TC
Location: 7062 - 8354 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_12451_7
Type: pfam
Location: 8382 - 8876 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_12451_8
Type: pfam
Location: 9064 - 10989 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_12451_9
Type: CAZyme
Location: 11444 - 14038 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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