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Cluster: DianaHT_2018_SRR6795027_bin.13_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC DianaHT_2018_SRR6795027_bin.13_k141_509 DianaHT_2018_SRR6795027_bin.13_k141_509_2 413 2125 + 8.A.46.1.6
pfam DianaHT_2018_SRR6795027_bin.13_k141_509 DianaHT_2018_SRR6795027_bin.13_k141_509_3 2140 3537 + fn3 | DUF4960
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_509 DianaHT_2018_SRR6795027_bin.13_k141_509_4 3549 5081 + GH32
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_509 DianaHT_2018_SRR6795027_bin.13_k141_509_5 5203 7002 + GH32
TC DianaHT_2018_SRR6795027_bin.13_k141_509 DianaHT_2018_SRR6795027_bin.13_k141_509_6 7023 8198 + 2.A.1.7.17
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_509_2
Type: TC
Location: 413 - 2125 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_509_3
Type: pfam
Location: 2140 - 3537 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_509_4
Type: CAZyme
Location: 3549 - 5081 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_509_5
Type: CAZyme
Location: 5203 - 7002 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_509_6
Type: TC
Location: 7023 - 8198 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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