Cluster: DianaHT_2018_SRR6795027_bin.13_CGC29
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: DianaHT_2018_SRR6795027_bin.13
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795027_bin.13_k141_9652 | DianaHT_2018_SRR6795027_bin.13_k141_9652_4 | 4247 | 7327 | + | 2.A.6.3.6 |
| pfam | DianaHT_2018_SRR6795027_bin.13_k141_9652 | DianaHT_2018_SRR6795027_bin.13_k141_9652_5 | 7324 | 8811 | + | OEP | OEP |
| TC | DianaHT_2018_SRR6795027_bin.13_k141_9652 | DianaHT_2018_SRR6795027_bin.13_k141_9652_6 | 8958 | 11975 | + | 2.A.6.3.11 |
| STP | DianaHT_2018_SRR6795027_bin.13_k141_9652 | DianaHT_2018_SRR6795027_bin.13_k141_9652_7 | 11968 | 12570 | - | Nitroreductase |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.13_k141_9652 | DianaHT_2018_SRR6795027_bin.13_k141_9652_8 | 12665 | 13678 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | DianaHT_2018_SRR6795027_bin.13_k141_9652 | DianaHT_2018_SRR6795027_bin.13_k141_9652_9 | 13883 | 16081 | + | GH97 |
| pfam | DianaHT_2018_SRR6795027_bin.13_k141_9652 | DianaHT_2018_SRR6795027_bin.13_k141_9652_10 | 16184 | 17557 | - | SusD_RagB | SusD-like_3 |
| TC | DianaHT_2018_SRR6795027_bin.13_k141_9652 | DianaHT_2018_SRR6795027_bin.13_k141_9652_11 | 17577 | 20744 | - | 1.B.14.6.1 |
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_9652_4
Type: TC
Location: 4247 - 7327 (+)
Type: TC
Location: 4247 - 7327 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_9652_5
Type: pfam
Location: 7324 - 8811 (+)
Type: pfam
Location: 7324 - 8811 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_9652_6
Type: TC
Location: 8958 - 11975 (+)
Type: TC
Location: 8958 - 11975 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_9652_7
Type: STP
Location: 11968 - 12570 (-)
Type: STP
Location: 11968 - 12570 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_9652_8
Type:
Location: 12665 - 13678 (-)
Type:
Location: 12665 - 13678 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_9652_9
Type: CAZyme
Location: 13883 - 16081 (+)
Type: CAZyme
Location: 13883 - 16081 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_9652_10
Type: pfam
Location: 16184 - 17557 (-)
Type: pfam
Location: 16184 - 17557 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_9652_11
Type: TC
Location: 17577 - 20744 (-)
Type: TC
Location: 17577 - 20744 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
CABUKU01
Species
CABUKU01 sp902492205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.