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Cluster: DianaHT_2018_SRR6795027_bin.13_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC DianaHT_2018_SRR6795027_bin.13_k141_130 DianaHT_2018_SRR6795027_bin.13_k141_130_14 18444 20087 - 2.A.21.9.2
TF DianaHT_2018_SRR6795027_bin.13_k141_130 DianaHT_2018_SRR6795027_bin.13_k141_130_15 20278 21126 + HTH_AraC
TF DianaHT_2018_SRR6795027_bin.13_k141_130 DianaHT_2018_SRR6795027_bin.13_k141_130_16 21250 22146 + HTH_AraC
CAZyme DianaHT_2018_SRR6795027_bin.13_k141_130 DianaHT_2018_SRR6795027_bin.13_k141_130_17 22426 23595 - GH171
STP DianaHT_2018_SRR6795027_bin.13_k141_130 DianaHT_2018_SRR6795027_bin.13_k141_130_18 23690 24226 + HD
TC DianaHT_2018_SRR6795027_bin.13_k141_130 DianaHT_2018_SRR6795027_bin.13_k141_130_19 24353 27067 + 1.B.42.1.8
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_130_14
Type: TC
Location: 18444 - 20087 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_130_15
Type: TF
Location: 20278 - 21126 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_130_16
Type: TF
Location: 21250 - 22146 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_130_17
Type: CAZyme
Location: 22426 - 23595 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_130_18
Type: STP
Location: 23690 - 24226 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.13_k141_130_19
Type: TC
Location: 24353 - 27067 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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