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Cluster: DianaHT_2018_SRR6795020_bin.19_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC DianaHT_2018_SRR6795020_bin.19_k141_5747 DianaHT_2018_SRR6795020_bin.19_k141_5747_149 170783 172342 + 2.A.2.5.1
CAZyme DianaHT_2018_SRR6795020_bin.19_k141_5747 DianaHT_2018_SRR6795020_bin.19_k141_5747_150 172460 174055 + GH28
CAZyme DianaHT_2018_SRR6795020_bin.19_k141_5747 DianaHT_2018_SRR6795020_bin.19_k141_5747_151 174185 176368 + CE19 | CE8
pfam DianaHT_2018_SRR6795020_bin.19_k141_5747 DianaHT_2018_SRR6795020_bin.19_k141_5747_152 176418 177086 + Lipase_GDSL | Lipase_GDSL_2
CAZyme DianaHT_2018_SRR6795020_bin.19_k141_5747 DianaHT_2018_SRR6795020_bin.19_k141_5747_153 177194 178432 + GH105
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_5747_149
Type: TC
Location: 170783 - 172342 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_5747_150
Type: CAZyme
Location: 172460 - 174055 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_5747_151
Type: CAZyme
Location: 174185 - 176368 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_5747_152
Type: pfam
Location: 176418 - 177086 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_5747_153
Type: CAZyme
Location: 177194 - 178432 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
DianaHT_2018_SRR6795020_bin.19_k141_5747_152 vegan > omnivore 1.05375 0.01057

🧭 Explore Read Mapping of CGC

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