dbCAN Logo

Cluster: DianaHT_2018_SRR6795020_bin.19_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC DianaHT_2018_SRR6795020_bin.19_k141_23441 DianaHT_2018_SRR6795020_bin.19_k141_23441_12 13710 15392 + 2.A.66.4.4
pfam DianaHT_2018_SRR6795020_bin.19_k141_23441 DianaHT_2018_SRR6795020_bin.19_k141_23441_13 15399 17339 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC DianaHT_2018_SRR6795020_bin.19_k141_23441 DianaHT_2018_SRR6795020_bin.19_k141_23441_14 17705 19318 + 3.A.1.5.27
TC DianaHT_2018_SRR6795020_bin.19_k141_23441 DianaHT_2018_SRR6795020_bin.19_k141_23441_15 19474 20430 + 3.A.1.5.38
TC DianaHT_2018_SRR6795020_bin.19_k141_23441 DianaHT_2018_SRR6795020_bin.19_k141_23441_16 20434 22449 + 3.A.1.5.25
TC DianaHT_2018_SRR6795020_bin.19_k141_23441 DianaHT_2018_SRR6795020_bin.19_k141_23441_17 22450 23277 + 3.A.1.5.27
CAZyme DianaHT_2018_SRR6795020_bin.19_k141_23441 DianaHT_2018_SRR6795020_bin.19_k141_23441_18 23409 24335 + CE7
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_23441_12
Type: TC
Location: 13710 - 15392 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_23441_13
Type: pfam
Location: 15399 - 17339 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_23441_14
Type: TC
Location: 17705 - 19318 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_23441_15
Type: TC
Location: 19474 - 20430 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_23441_16
Type: TC
Location: 20434 - 22449 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_23441_17
Type: TC
Location: 22450 - 23277 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_23441_18
Type: CAZyme
Location: 23409 - 24335 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List