Cluster: DianaHT_2018_SRR6795020_bin.19_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: DianaHT_2018_SRR6795020_bin.19
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795020_bin.19_k141_21586 | DianaHT_2018_SRR6795020_bin.19_k141_21586_129 | 148151 | 148459 | + | 4.A.3.2.2 |
| TC | DianaHT_2018_SRR6795020_bin.19_k141_21586 | DianaHT_2018_SRR6795020_bin.19_k141_21586_130 | 148557 | 149867 | + | 4.A.3.2.9 |
| CAZyme | DianaHT_2018_SRR6795020_bin.19_k141_21586 | DianaHT_2018_SRR6795020_bin.19_k141_21586_131 | 149967 | 151430 | + | GH1 |
| CAZyme | DianaHT_2018_SRR6795020_bin.19_k141_21586 | DianaHT_2018_SRR6795020_bin.19_k141_21586_132 | 151497 | 152930 | + | GH1 |
| TC | DianaHT_2018_SRR6795020_bin.19_k141_21586 | DianaHT_2018_SRR6795020_bin.19_k141_21586_133 | 152930 | 153850 | + | 2.A.69.4.5 |
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_21586_129
Type: TC
Location: 148151 - 148459 (+)
Type: TC
Location: 148151 - 148459 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_21586_130
Type: TC
Location: 148557 - 149867 (+)
Type: TC
Location: 148557 - 149867 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_21586_131
Type: CAZyme
Location: 149967 - 151430 (+)
Type: CAZyme
Location: 149967 - 151430 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_21586_132
Type: CAZyme
Location: 151497 - 152930 (+)
Type: CAZyme
Location: 151497 - 152930 (+)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_21586_133
Type: TC
Location: 152930 - 153850 (+)
Type: TC
Location: 152930 - 153850 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.