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Cluster: DianaHT_2018_SRR6795020_bin.19_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme DianaHT_2018_SRR6795020_bin.19_k141_18659 DianaHT_2018_SRR6795020_bin.19_k141_18659_2 844 1962 - GT4
pfam DianaHT_2018_SRR6795020_bin.19_k141_18659 DianaHT_2018_SRR6795020_bin.19_k141_18659_3 1968 3185 - Epimerase | Polysacc_synt_C
TC DianaHT_2018_SRR6795020_bin.19_k141_18659 DianaHT_2018_SRR6795020_bin.19_k141_18659_4 3187 4245 - 9.B.18.2.1
CAZyme DianaHT_2018_SRR6795020_bin.19_k141_18659 DianaHT_2018_SRR6795020_bin.19_k141_18659_5 4246 5022 - GT26
TC DianaHT_2018_SRR6795020_bin.19_k141_18659 DianaHT_2018_SRR6795020_bin.19_k141_18659_6 5022 5687 - 9.B.18.1.2
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_18659_2
Type: CAZyme
Location: 844 - 1962 (-)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_18659_3
Type: pfam
Location: 1968 - 3185 (-)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_18659_4
Type: TC
Location: 3187 - 4245 (-)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_18659_5
Type: CAZyme
Location: 4246 - 5022 (-)
Gene ID: DianaHT_2018_SRR6795020_bin.19_k141_18659_6
Type: TC
Location: 5022 - 5687 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
DianaHT_2018_SRR6795020_bin.19_k141_18659_3 vegetarian > omnivore 1.23909 0.03718
DianaHT_2018_SRR6795020_bin.19_k141_18659_3 vegetarian > vegan 1.76335 0.01054

🧭 Explore Read Mapping of CGC

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