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Cluster: DM196_bin.78_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_74973 k141_74973_46 55851 59453 + GH106
CAZyme k141_74973 k141_74973_47 59586 61040 - GH13
TC k141_74973 k141_74973_48 61295 62125 + 3.D.10.1.2
TC k141_74973 k141_74973_49 62144 64072 + 3.D.10.1.2
TC k141_74973 k141_74973_50 64093 64854 + 3.D.10.1.5
NULL(UNKNOWN) k141_74973 k141_74973_51 64966 65304 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_74973 k141_74973_52 65306 66964 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_74973 k141_74973_53 66970 69144 - GH50
pfam k141_74973 k141_74973_54 69370 71001 - Cpn60_TCP1
pfam k141_74973 k141_74973_55 71029 71325 - Cpn10
TC k141_74973 k141_74973_56 71456 73399 - 1.A.33.1.2
Gene ID: k141_74973_46
Type: CAZyme
Location: 55851 - 59453 (+)
Gene ID: k141_74973_47
Type: CAZyme
Location: 59586 - 61040 (-)
Gene ID: k141_74973_48
Type: TC
Location: 61295 - 62125 (+)
Gene ID: k141_74973_49
Type: TC
Location: 62144 - 64072 (+)
Gene ID: k141_74973_50
Type: TC
Location: 64093 - 64854 (+)
Gene ID: k141_74973_51
Type:
Location: 64966 - 65304 (-)
Gene ID: k141_74973_52
Type:
Location: 65306 - 66964 (-)
Gene ID: k141_74973_53
Type: CAZyme
Location: 66970 - 69144 (-)
Gene ID: k141_74973_54
Type: pfam
Location: 69370 - 71001 (-)
Gene ID: k141_74973_55
Type: pfam
Location: 71029 - 71325 (-)
Gene ID: k141_74973_56
Type: TC
Location: 71456 - 73399 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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