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Cluster: DM196_bin.78_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_404558 k141_404558_30 38992 40731 - 3.A.1.106.2
CAZyme k141_404558 k141_404558_31 40930 45093 - GH2
pfam k141_404558 k141_404558_32 45291 46175 - Ligase_CoA | CoA_binding | Succ_CoA_lig
pfam k141_404558 k141_404558_33 46195 47388 - Ligase_CoA | ATP-grasp_2
TC k141_404558 k141_404558_34 47829 49112 + 1.A.23.4.2
pfam k141_404558 k141_404558_35 49221 50375 + Metallophos | Pur_ac_phosph_N
TC k141_404558 k141_404558_36 50450 52948 - 3.A.9.1.2
Gene ID: k141_404558_30
Type: TC
Location: 38992 - 40731 (-)
Gene ID: k141_404558_31
Type: CAZyme
Location: 40930 - 45093 (-)
Gene ID: k141_404558_32
Type: pfam
Location: 45291 - 46175 (-)
Gene ID: k141_404558_33
Type: pfam
Location: 46195 - 47388 (-)
Gene ID: k141_404558_34
Type: TC
Location: 47829 - 49112 (+)
Gene ID: k141_404558_35
Type: pfam
Location: 49221 - 50375 (+)
Gene ID: k141_404558_36
Type: TC
Location: 50450 - 52948 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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