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Cluster: DM179_62_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_26933 k141_26933_11 15658 17508 + GT2
NULL(UNKNOWN) k141_26933 k141_26933_12 17505 19370 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_26933 k141_26933_13 19793 20779 + GH18
CAZyme k141_26933 k141_26933_14 20845 22683 + CE4
pfam k141_26933 k141_26933_15 23259 24422 + ANF_receptor | Peripla_BP_5 | Peripla_BP_6
TC k141_26933 k141_26933_16 24792 26165 + 2.A.22.5.3
TC k141_26933 k141_26933_17 27060 27965 + 2.A.7.3.12
TC k141_26933 k141_26933_18 28056 28976 + 2.A.7.3.31
NULL(UNKNOWN) k141_26933 k141_26933_19 29075 29212 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_26933 k141_26933_20 29423 31240 + WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep
TC k141_26933 k141_26933_21 31895 33385 + 2.A.35.2.1
Gene ID: k141_26933_11
Type: CAZyme
Location: 15658 - 17508 (+)
Gene ID: k141_26933_12
Type:
Location: 17505 - 19370 (+)
Gene ID: k141_26933_13
Type: CAZyme
Location: 19793 - 20779 (+)
Gene ID: k141_26933_14
Type: CAZyme
Location: 20845 - 22683 (+)
Gene ID: k141_26933_15
Type: pfam
Location: 23259 - 24422 (+)
Gene ID: k141_26933_16
Type: TC
Location: 24792 - 26165 (+)
Gene ID: k141_26933_17
Type: TC
Location: 27060 - 27965 (+)
Gene ID: k141_26933_18
Type: TC
Location: 28056 - 28976 (+)
Gene ID: k141_26933_19
Type:
Location: 29075 - 29212 (-)
Gene ID: k141_26933_20
Type: pfam
Location: 29423 - 31240 (+)
Gene ID: k141_26933_21
Type: TC
Location: 31895 - 33385 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_26933_15 vegetarian > omnivore 2.43939 0.00736

🧭 Explore Read Mapping of CGC

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