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Cluster: DM174_bin.6_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_147219 k141_147219_31 35885 37054 - CE9
STP k141_147219 k141_147219_32 37173 38339 - SIS | SIS
TF k141_147219 k141_147219_33 38454 39185 - GntR
TC k141_147219 k141_147219_34 39370 40452 - 4.A.6.1.4
TC k141_147219 k141_147219_35 40442 41242 - 4.A.6.1.4
TC k141_147219 k141_147219_36 41333 41815 - 4.A.6.1.4
pfam k141_147219 k141_147219_37 41852 42133 - YajC
TC k141_147219 k141_147219_38 42133 42576 - 4.A.6.1.16
Gene ID: k141_147219_31
Type: CAZyme
Location: 35885 - 37054 (-)
Gene ID: k141_147219_32
Type: STP
Location: 37173 - 38339 (-)
Gene ID: k141_147219_33
Type: TF
Location: 38454 - 39185 (-)
Gene ID: k141_147219_34
Type: TC
Location: 39370 - 40452 (-)
Gene ID: k141_147219_35
Type: TC
Location: 40442 - 41242 (-)
Gene ID: k141_147219_36
Type: TC
Location: 41333 - 41815 (-)
Gene ID: k141_147219_37
Type: pfam
Location: 41852 - 42133 (-)
Gene ID: k141_147219_38
Type: TC
Location: 42133 - 42576 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_147219_37 vegan > omnivore 1.03976 0.00701

🧭 Explore Read Mapping of CGC

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