Cluster: DM174_bin.6_CGC16
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: DM174_bin.6
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_62333 | k141_62333_3 | 1529 | 3010 | + | 3.A.1.8.1 |
| TC | k141_62333 | k141_62333_4 | 3014 | 4084 | + | 3.A.1.1.3 |
| pfam | k141_62333 | k141_62333_5 | 4535 | 5818 | + | HGD-D |
| TC | k141_62333 | k141_62333_6 | 6003 | 7613 | + | 3.A.1.5.11 |
| TC | k141_62333 | k141_62333_7 | 7700 | 8653 | + | 3.A.1.5.11 |
| TC | k141_62333 | k141_62333_8 | 8653 | 9480 | + | 3.A.1.5.39 |
| TC | k141_62333 | k141_62333_9 | 9484 | 10482 | + | 3.A.1.5.35 |
| TC | k141_62333 | k141_62333_10 | 10469 | 11254 | + | 3.A.1.5.36 |
| pfam | k141_62333 | k141_62333_11 | 11332 | 12495 | + | HGD-D |
| pfam | k141_62333 | k141_62333_12 | 12547 | 13311 | + | BcrAD_BadFG |
| CAZyme | k141_62333 | k141_62333_13 | 13328 | 14572 | + | GT4 |
Gene ID: k141_62333_3
Type: TC
Location: 1529 - 3010 (+)
Type: TC
Location: 1529 - 3010 (+)
Gene ID: k141_62333_4
Type: TC
Location: 3014 - 4084 (+)
Type: TC
Location: 3014 - 4084 (+)
Gene ID: k141_62333_5
Type: pfam
Location: 4535 - 5818 (+)
Type: pfam
Location: 4535 - 5818 (+)
Gene ID: k141_62333_6
Type: TC
Location: 6003 - 7613 (+)
Type: TC
Location: 6003 - 7613 (+)
Gene ID: k141_62333_7
Type: TC
Location: 7700 - 8653 (+)
Type: TC
Location: 7700 - 8653 (+)
Gene ID: k141_62333_8
Type: TC
Location: 8653 - 9480 (+)
Type: TC
Location: 8653 - 9480 (+)
Gene ID: k141_62333_9
Type: TC
Location: 9484 - 10482 (+)
Type: TC
Location: 9484 - 10482 (+)
Gene ID: k141_62333_10
Type: TC
Location: 10469 - 11254 (+)
Type: TC
Location: 10469 - 11254 (+)
Gene ID: k141_62333_11
Type: pfam
Location: 11332 - 12495 (+)
Type: pfam
Location: 11332 - 12495 (+)
Gene ID: k141_62333_12
Type: pfam
Location: 12547 - 13311 (+)
Type: pfam
Location: 12547 - 13311 (+)
Gene ID: k141_62333_13
Type: CAZyme
Location: 13328 - 14572 (+)
Type: CAZyme
Location: 13328 - 14572 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_62333_6 | vegan > omnivore | 3.20712 | 0.00701 |
| k141_62333_7 | vegan > omnivore | 2.72218 | 0.00701 |
| k141_62333_8 | vegan > omnivore | 2.90740 | 0.00701 |
| k141_62333_9 | vegan > omnivore | 1.17285 | 0.00701 |
| k141_62333_10 | vegan > omnivore | 2.62722 | 0.00701 |