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Cluster: DM174_bin.6_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_147219 k141_147219_12 12511 12849 - 4.A.3.1.2
TF k141_147219 k141_147219_13 13064 14068 - LacI
TC k141_147219 k141_147219_14 14426 16195 + 4.A.3.1.1
CAZyme k141_147219 k141_147219_15 16262 17701 + GH1
TF k141_147219 k141_147219_16 17963 19000 - LacI
CAZyme k141_147219 k141_147219_17 19342 20784 + GH1
TC k141_147219 k141_147219_18 20961 22721 + 4.A.3.1.1
TF k141_147219 k141_147219_19 22979 23989 - LacI
TC k141_147219 k141_147219_20 24265 26043 + 4.A.3.1.1
CAZyme k141_147219 k141_147219_21 26119 27540 + GH1
Gene ID: k141_147219_12
Type: TC
Location: 12511 - 12849 (-)
Gene ID: k141_147219_13
Type: TF
Location: 13064 - 14068 (-)
Gene ID: k141_147219_14
Type: TC
Location: 14426 - 16195 (+)
Gene ID: k141_147219_15
Type: CAZyme
Location: 16262 - 17701 (+)
Gene ID: k141_147219_16
Type: TF
Location: 17963 - 19000 (-)
Gene ID: k141_147219_17
Type: CAZyme
Location: 19342 - 20784 (+)
Gene ID: k141_147219_18
Type: TC
Location: 20961 - 22721 (+)
Gene ID: k141_147219_19
Type: TF
Location: 22979 - 23989 (-)
Gene ID: k141_147219_20
Type: TC
Location: 24265 - 26043 (+)
Gene ID: k141_147219_21
Type: CAZyme
Location: 26119 - 27540 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_147219_16 vegetarian > omnivore 1.01306 0.02677

🧭 Explore Read Mapping of CGC

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