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Cluster: DM166_bin.31_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_148460 k141_148460_19 21292 21630 - 4.A.3.1.2
TF k141_148460 k141_148460_20 21845 22849 - LacI
TC k141_148460 k141_148460_21 23206 24981 + 4.A.3.1.1
CAZyme k141_148460 k141_148460_22 25048 26487 + GH1
TF k141_148460 k141_148460_23 26755 27792 - LacI
CAZyme k141_148460 k141_148460_24 28134 29576 + GH1
TC k141_148460 k141_148460_25 29753 31513 + 4.A.3.1.1
TF k141_148460 k141_148460_26 31847 32857 - LacI
TC k141_148460 k141_148460_27 33133 34911 + 4.A.3.1.1
CAZyme k141_148460 k141_148460_28 34988 36409 + GH1
TF k141_148460 k141_148460_29 36903 37667 - HTH_DeoR
sulfatase k141_148460 k141_148460_30 37873 38925 + S1_4
CAZyme k141_148460 k141_148460_31 39455 40624 - CE9
TF k141_148460 k141_148460_32 40766 41497 - GntR
TC k141_148460 k141_148460_33 41718 43199 - 4.A.1.1.7
Gene ID: k141_148460_19
Type: TC
Location: 21292 - 21630 (-)
Gene ID: k141_148460_20
Type: TF
Location: 21845 - 22849 (-)
Gene ID: k141_148460_21
Type: TC
Location: 23206 - 24981 (+)
Gene ID: k141_148460_22
Type: CAZyme
Location: 25048 - 26487 (+)
Gene ID: k141_148460_23
Type: TF
Location: 26755 - 27792 (-)
Gene ID: k141_148460_24
Type: CAZyme
Location: 28134 - 29576 (+)
Gene ID: k141_148460_25
Type: TC
Location: 29753 - 31513 (+)
Gene ID: k141_148460_26
Type: TF
Location: 31847 - 32857 (-)
Gene ID: k141_148460_27
Type: TC
Location: 33133 - 34911 (+)
Gene ID: k141_148460_28
Type: CAZyme
Location: 34988 - 36409 (+)
Gene ID: k141_148460_29
Type: TF
Location: 36903 - 37667 (-)
Gene ID: k141_148460_30
Type: sulfatase
Location: 37873 - 38925 (+)
Gene ID: k141_148460_31
Type: CAZyme
Location: 39455 - 40624 (-)
Gene ID: k141_148460_32
Type: TF
Location: 40766 - 41497 (-)
Gene ID: k141_148460_33
Type: TC
Location: 41718 - 43199 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_148460_23 vegetarian > omnivore 1.06588 0.02677

🧭 Explore Read Mapping of CGC

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