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Cluster: DM140_maxbin.005_sub_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_219717 k141_219717_9 7791 9272 + 3.A.1.8.1
TC k141_219717 k141_219717_10 9276 10346 + 3.A.1.1.3
pfam k141_219717 k141_219717_11 10797 12080 + HGD-D
TC k141_219717 k141_219717_12 12265 13875 + 3.A.1.5.11
TC k141_219717 k141_219717_13 13962 14915 + 3.A.1.5.11
TC k141_219717 k141_219717_14 14915 15742 + 3.A.1.5.39
TC k141_219717 k141_219717_15 15746 16744 + 3.A.1.5.35
TC k141_219717 k141_219717_16 16731 17516 + 3.A.1.5.36
pfam k141_219717 k141_219717_17 17594 18757 + HGD-D
pfam k141_219717 k141_219717_18 18809 19573 + BcrAD_BadFG
CAZyme k141_219717 k141_219717_19 19587 20831 + GT4
Gene ID: k141_219717_9
Type: TC
Location: 7791 - 9272 (+)
Gene ID: k141_219717_10
Type: TC
Location: 9276 - 10346 (+)
Gene ID: k141_219717_11
Type: pfam
Location: 10797 - 12080 (+)
Gene ID: k141_219717_12
Type: TC
Location: 12265 - 13875 (+)
Gene ID: k141_219717_13
Type: TC
Location: 13962 - 14915 (+)
Gene ID: k141_219717_14
Type: TC
Location: 14915 - 15742 (+)
Gene ID: k141_219717_15
Type: TC
Location: 15746 - 16744 (+)
Gene ID: k141_219717_16
Type: TC
Location: 16731 - 17516 (+)
Gene ID: k141_219717_17
Type: pfam
Location: 17594 - 18757 (+)
Gene ID: k141_219717_18
Type: pfam
Location: 18809 - 19573 (+)
Gene ID: k141_219717_19
Type: CAZyme
Location: 19587 - 20831 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_219717_12 vegan > omnivore 2.76323 0.00701
k141_219717_13 vegan > omnivore 2.67368 0.00701
k141_219717_14 vegan > omnivore 2.87922 0.00701
k141_219717_16 vegan > omnivore 2.50827 0.00701

🧭 Explore Read Mapping of CGC

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