Cluster: DM137_25_CGC9
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: DM137_25
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_4378 | k141_4378_79 | 81567 | 83300 | - | GH13_30 |
| STP | k141_4378 | k141_4378_80 | 83883 | 84629 | - | STAS |
| STP | k141_4378 | k141_4378_81 | 84708 | 87053 | - | GAF | SpoIIE |
| TC | k141_4378 | k141_4378_82 | 87802 | 88830 | - | 3.A.1.5.36 |
| TC | k141_4378 | k141_4378_83 | 88831 | 89922 | - | 3.A.1.5.34 |
| TC | k141_4378 | k141_4378_84 | 89925 | 90860 | - | 3.A.1.5.11 |
| TC | k141_4378 | k141_4378_85 | 90875 | 91912 | - | 3.A.1.5.37 |
| TC | k141_4378 | k141_4378_86 | 92068 | 93744 | - | 3.A.1.5.35 |
Gene ID: k141_4378_79
Type: CAZyme
Location: 81567 - 83300 (-)
Type: CAZyme
Location: 81567 - 83300 (-)
Gene ID: k141_4378_80
Type: STP
Location: 83883 - 84629 (-)
Type: STP
Location: 83883 - 84629 (-)
Gene ID: k141_4378_81
Type: STP
Location: 84708 - 87053 (-)
Type: STP
Location: 84708 - 87053 (-)
Gene ID: k141_4378_82
Type: TC
Location: 87802 - 88830 (-)
Type: TC
Location: 87802 - 88830 (-)
Gene ID: k141_4378_83
Type: TC
Location: 88831 - 89922 (-)
Type: TC
Location: 88831 - 89922 (-)
Gene ID: k141_4378_84
Type: TC
Location: 89925 - 90860 (-)
Type: TC
Location: 89925 - 90860 (-)
Gene ID: k141_4378_85
Type: TC
Location: 90875 - 91912 (-)
Type: TC
Location: 90875 - 91912 (-)
Gene ID: k141_4378_86
Type: TC
Location: 92068 - 93744 (-)
Type: TC
Location: 92068 - 93744 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.