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Cluster: DM130_127_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_17294 k141_17294_12 14757 16472 - 1.A.11.2.7
NULL(UNKNOWN) k141_17294 k141_17294_13 16737 16973 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_17294 k141_17294_14 17125 18468 + 2.A.66.1.33
CAZyme k141_17294 k141_17294_15 18530 21523 + GH3
TF k141_17294 k141_17294_16 22273 23127 - HTH_AraC
CAZyme k141_17294 k141_17294_17 23257 25518 + GT35
STP k141_17294 k141_17294_18 25726 26931 + Aminotran_1_2
TF k141_17294 k141_17294_19 27025 27933 - HTH_AraC
CAZyme k141_17294 k141_17294_20 28167 30692 + GH31_2
TC k141_17294 k141_17294_21 30763 31794 + 2.A.56.1.2
pfam k141_17294 k141_17294_22 31798 32307 + DctQ
TC k141_17294 k141_17294_23 32304 33605 + 2.A.56.1.5
Gene ID: k141_17294_12
Type: TC
Location: 14757 - 16472 (-)
Gene ID: k141_17294_13
Type:
Location: 16737 - 16973 (-)
Gene ID: k141_17294_14
Type: TC
Location: 17125 - 18468 (+)
Gene ID: k141_17294_15
Type: CAZyme
Location: 18530 - 21523 (+)
Gene ID: k141_17294_16
Type: TF
Location: 22273 - 23127 (-)
Gene ID: k141_17294_17
Type: CAZyme
Location: 23257 - 25518 (+)
Gene ID: k141_17294_18
Type: STP
Location: 25726 - 26931 (+)
Gene ID: k141_17294_19
Type: TF
Location: 27025 - 27933 (-)
Gene ID: k141_17294_20
Type: CAZyme
Location: 28167 - 30692 (+)
Gene ID: k141_17294_21
Type: TC
Location: 30763 - 31794 (+)
Gene ID: k141_17294_22
Type: pfam
Location: 31798 - 32307 (+)
Gene ID: k141_17294_23
Type: TC
Location: 32304 - 33605 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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