Cluster: DM130_127_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: DM130_127
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_17294 | k141_17294_2 | 1198 | 3387 | - | GH2 |
| pfam | k141_17294 | k141_17294_3 | 3466 | 4953 | - | MFS_2 |
| CAZyme | k141_17294 | k141_17294_4 | 5194 | 6495 | + | GH1 |
| TF | k141_17294 | k141_17294_5 | 6564 | 7763 | + | HTH_AraC | HTH_AraC |
| TC | k141_17294 | k141_17294_6 | 8125 | 9522 | + | 2.A.66.1.32 |
| TC | k141_17294 | k141_17294_7 | 9525 | 10103 | + | 2.A.115.2.14 |
| TC | k141_17294 | k141_17294_8 | 10148 | 11521 | - | 2.A.66.1.32 |
Gene ID: k141_17294_2
Type: CAZyme
Location: 1198 - 3387 (-)
Type: CAZyme
Location: 1198 - 3387 (-)
Gene ID: k141_17294_3
Type: pfam
Location: 3466 - 4953 (-)
Type: pfam
Location: 3466 - 4953 (-)
Gene ID: k141_17294_4
Type: CAZyme
Location: 5194 - 6495 (+)
Type: CAZyme
Location: 5194 - 6495 (+)
Gene ID: k141_17294_5
Type: TF
Location: 6564 - 7763 (+)
Type: TF
Location: 6564 - 7763 (+)
Gene ID: k141_17294_6
Type: TC
Location: 8125 - 9522 (+)
Type: TC
Location: 8125 - 9522 (+)
Gene ID: k141_17294_7
Type: TC
Location: 9525 - 10103 (+)
Type: TC
Location: 9525 - 10103 (+)
Gene ID: k141_17294_8
Type: TC
Location: 10148 - 11521 (-)
Type: TC
Location: 10148 - 11521 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900556255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_17294_5 | vegan > omnivore | 1.01081 | 0.01057 |
| k141_17294_7 | vegetarian > vegan | 1.34031 | 0.00364 |