Cluster: DM130_127_CGC26
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: DM130_127
- CGC Family ID: CGCFAM_02377
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_151932 | k141_151932_2 | 1496 | 2911 | - | GH43_35 |
| CAZyme | k141_151932 | k141_151932_3 | 2922 | 5351 | - | GH2 |
| CAZyme | k141_151932 | k141_151932_4 | 5365 | 7761 | - | GH3 |
| CAZyme | k141_151932 | k141_151932_5 | 7772 | 8821 | - | GH43_24 |
| TC | k141_151932 | k141_151932_6 | 8882 | 10273 | - | 2.A.2.3.2 |
| TF | k141_151932 | k141_151932_7 | 10506 | 11729 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | k141_151932 | k141_151932_8 | 11726 | 11962 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_151932 | k141_151932_9 | 12186 | 14825 | + | CBM67 | GH78 |
| CAZyme | k141_151932 | k141_151932_10 | 14914 | 16266 | + | GH43_24 |
| CAZyme | k141_151932 | k141_151932_11 | 16277 | 18472 | + | GH2 |
| NULL(UNKNOWN) | k141_151932 | k141_151932_12 | 18476 | 18754 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_151932 | k141_151932_13 | 19576 | 20859 | - | 2.A.47.4.1 |
| pfam | k141_151932 | k141_151932_14 | 20952 | 21584 | - | Fumerase_C |
| pfam | k141_151932 | k141_151932_15 | 21584 | 22483 | - | Fumerase |
| TC | k141_151932 | k141_151932_16 | 22528 | 23802 | - | 2.A.47.5.2 |
Gene ID: k141_151932_2
Type: CAZyme
Location: 1496 - 2911 (-)
Type: CAZyme
Location: 1496 - 2911 (-)
Gene ID: k141_151932_3
Type: CAZyme
Location: 2922 - 5351 (-)
Type: CAZyme
Location: 2922 - 5351 (-)
Gene ID: k141_151932_4
Type: CAZyme
Location: 5365 - 7761 (-)
Type: CAZyme
Location: 5365 - 7761 (-)
Gene ID: k141_151932_5
Type: CAZyme
Location: 7772 - 8821 (-)
Type: CAZyme
Location: 7772 - 8821 (-)
Gene ID: k141_151932_6
Type: TC
Location: 8882 - 10273 (-)
Type: TC
Location: 8882 - 10273 (-)
Gene ID: k141_151932_7
Type: TF
Location: 10506 - 11729 (+)
Type: TF
Location: 10506 - 11729 (+)
Gene ID: k141_151932_8
Type:
Location: 11726 - 11962 (+)
Type:
Location: 11726 - 11962 (+)
Gene ID: k141_151932_9
Type: CAZyme
Location: 12186 - 14825 (+)
Type: CAZyme
Location: 12186 - 14825 (+)
Gene ID: k141_151932_10
Type: CAZyme
Location: 14914 - 16266 (+)
Type: CAZyme
Location: 14914 - 16266 (+)
Gene ID: k141_151932_11
Type: CAZyme
Location: 16277 - 18472 (+)
Type: CAZyme
Location: 16277 - 18472 (+)
Gene ID: k141_151932_12
Type:
Location: 18476 - 18754 (+)
Type:
Location: 18476 - 18754 (+)
Gene ID: k141_151932_13
Type: TC
Location: 19576 - 20859 (-)
Type: TC
Location: 19576 - 20859 (-)
Gene ID: k141_151932_14
Type: pfam
Location: 20952 - 21584 (-)
Type: pfam
Location: 20952 - 21584 (-)
Gene ID: k141_151932_15
Type: pfam
Location: 21584 - 22483 (-)
Type: pfam
Location: 21584 - 22483 (-)
Gene ID: k141_151932_16
Type: TC
Location: 22528 - 23802 (-)
Type: TC
Location: 22528 - 23802 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900556255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.