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Cluster: DM130_127_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_175371 k141_175371_61 68729 70540 - 3.A.1.135.6
TC k141_175371 k141_175371_62 70542 72740 - 3.A.1.135.6
TF k141_175371 k141_175371_63 72724 73236 - MarR
CAZyme k141_175371 k141_175371_64 73363 74505 - GH3
pfam k141_175371 k141_175371_65 74849 75493 + Ykof | Ykof
TC k141_175371 k141_175371_66 75496 76095 + 3.A.1.30.1
TC k141_175371 k141_175371_67 76100 77602 + 3.A.1.30.1
TC k141_175371 k141_175371_68 77603 78343 + 3.A.1.30.1
STP k141_175371 k141_175371_69 78463 78975 + Nitroreductase
STP k141_175371 k141_175371_70 79061 79456 - Nitro_FeMo-Co
CAZyme k141_175371 k141_175371_71 79637 81883 - GH2
Gene ID: k141_175371_61
Type: TC
Location: 68729 - 70540 (-)
Gene ID: k141_175371_62
Type: TC
Location: 70542 - 72740 (-)
Gene ID: k141_175371_63
Type: TF
Location: 72724 - 73236 (-)
Gene ID: k141_175371_64
Type: CAZyme
Location: 73363 - 74505 (-)
Gene ID: k141_175371_65
Type: pfam
Location: 74849 - 75493 (+)
Gene ID: k141_175371_66
Type: TC
Location: 75496 - 76095 (+)
Gene ID: k141_175371_67
Type: TC
Location: 76100 - 77602 (+)
Gene ID: k141_175371_68
Type: TC
Location: 77603 - 78343 (+)
Gene ID: k141_175371_69
Type: STP
Location: 78463 - 78975 (+)
Gene ID: k141_175371_70
Type: STP
Location: 79061 - 79456 (-)
Gene ID: k141_175371_71
Type: CAZyme
Location: 79637 - 81883 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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