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Cluster: DM127_bin.22_CGC61

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_287517 k141_287517_4 3517 6111 - 1.B.14.6.14
pfam k141_287517 k141_287517_5 6205 7299 - Epimerase_2
TC k141_287517 k141_287517_6 7379 8014 + 1.A.62.2.1
STP k141_287517 k141_287517_7 8361 8864 + Sigma70_r2 | Sigma70_r4_2
TC k141_287517 k141_287517_8 9030 10805 + 3.B.1.1.6
TC k141_287517 k141_287517_9 10909 13611 - 2.A.21.9.1
CAZyme k141_287517 k141_287517_10 13623 14813 - GT2
Gene ID: k141_287517_4
Type: TC
Location: 3517 - 6111 (-)
Gene ID: k141_287517_5
Type: pfam
Location: 6205 - 7299 (-)
Gene ID: k141_287517_6
Type: TC
Location: 7379 - 8014 (+)
Gene ID: k141_287517_7
Type: STP
Location: 8361 - 8864 (+)
Gene ID: k141_287517_8
Type: TC
Location: 9030 - 10805 (+)
Gene ID: k141_287517_9
Type: TC
Location: 10909 - 13611 (-)
Gene ID: k141_287517_10
Type: CAZyme
Location: 13623 - 14813 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_287517_9 omnivore > vegetarian 1.64547 0.04715

🧭 Explore Read Mapping of CGC

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