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Cluster: DM127_bin.22_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_124547 k141_124547_142 202251 203579 + CBM6 | GH43_2
CAZyme k141_124547 k141_124547_143 203824 204828 + GH43_29
TC k141_124547 k141_124547_144 205122 208262 + 1.B.14.6.1
pfam k141_124547 k141_124547_145 208306 209991 + SusD_RagB | SusD-like_3
TF k141_124547 k141_124547_146 210064 213891 - HTH_AraC
CAZyme k141_124547 k141_124547_147 214079 215209 + CE1
CAZyme k141_124547 k141_124547_148 215259 216413 + CE1
NULL(UNKNOWN) k141_124547 k141_124547_149 216446 217144 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_124547 k141_124547_150 217147 218598 + GH43_7 | GH43_7
Gene ID: k141_124547_142
Type: CAZyme
Location: 202251 - 203579 (+)
Gene ID: k141_124547_143
Type: CAZyme
Location: 203824 - 204828 (+)
Gene ID: k141_124547_144
Type: TC
Location: 205122 - 208262 (+)
Gene ID: k141_124547_145
Type: pfam
Location: 208306 - 209991 (+)
Gene ID: k141_124547_146
Type: TF
Location: 210064 - 213891 (-)
Gene ID: k141_124547_147
Type: CAZyme
Location: 214079 - 215209 (+)
Gene ID: k141_124547_148
Type: CAZyme
Location: 215259 - 216413 (+)
Gene ID: k141_124547_149
Type:
Location: 216446 - 217144 (+)
Gene ID: k141_124547_150
Type: CAZyme
Location: 217147 - 218598 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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