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Cluster: DM127_bin.22_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_124547 k141_124547_119 167325 170810 - 1.B.14.6.1
NULL(UNKNOWN) k141_124547 k141_124547_120 171234 172082 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_124547 k141_124547_121 172158 172277 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_124547 k141_124547_122 172489 175899 + 1.B.14.6.1
pfam k141_124547 k141_124547_123 175922 177613 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) k141_124547 k141_124547_124 177723 177824 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_124547 k141_124547_125 177850 179016 + GH171
TC k141_124547 k141_124547_126 179074 180528 + 2.A.21.3.7
NULL(UNKNOWN) k141_124547 k141_124547_127 180546 183635 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_124547 k141_124547_128 183666 185546 + Metallophos | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4
CAZyme k141_124547 k141_124547_129 185579 187045 + GT2
Gene ID: k141_124547_119
Type: TC
Location: 167325 - 170810 (-)
Gene ID: k141_124547_120
Type:
Location: 171234 - 172082 (+)
Gene ID: k141_124547_121
Type:
Location: 172158 - 172277 (+)
Gene ID: k141_124547_122
Type: TC
Location: 172489 - 175899 (+)
Gene ID: k141_124547_123
Type: pfam
Location: 175922 - 177613 (+)
Gene ID: k141_124547_124
Type:
Location: 177723 - 177824 (-)
Gene ID: k141_124547_125
Type: CAZyme
Location: 177850 - 179016 (+)
Gene ID: k141_124547_126
Type: TC
Location: 179074 - 180528 (+)
Gene ID: k141_124547_127
Type:
Location: 180546 - 183635 (+)
Gene ID: k141_124547_128
Type: pfam
Location: 183666 - 185546 (+)
Gene ID: k141_124547_129
Type: CAZyme
Location: 185579 - 187045 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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