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Cluster: DM127_bin.22_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_40706 k141_40706_22 24141 24965 + 2.A.64.2.1
pfam k141_40706 k141_40706_23 24962 28402 + AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30
TC k141_40706 k141_40706_24 28701 30143 - 2.A.1.14.25
pfam k141_40706 k141_40706_25 30282 31238 - KduI
TC k141_40706 k141_40706_26 31288 32661 - 4.A.5.1.2
CAZyme k141_40706 k141_40706_27 32954 34177 + GH105
CAZyme k141_40706 k141_40706_28 34210 35172 + CE8
STP k141_40706 k141_40706_29 35169 35522 - AraC_binding
CAZyme k141_40706 k141_40706_30 35583 37349 + CE12 | CE8
Gene ID: k141_40706_22
Type: TC
Location: 24141 - 24965 (+)
Gene ID: k141_40706_23
Type: pfam
Location: 24962 - 28402 (+)
Gene ID: k141_40706_24
Type: TC
Location: 28701 - 30143 (-)
Gene ID: k141_40706_25
Type: pfam
Location: 30282 - 31238 (-)
Gene ID: k141_40706_26
Type: TC
Location: 31288 - 32661 (-)
Gene ID: k141_40706_27
Type: CAZyme
Location: 32954 - 34177 (+)
Gene ID: k141_40706_28
Type: CAZyme
Location: 34210 - 35172 (+)
Gene ID: k141_40706_29
Type: STP
Location: 35169 - 35522 (-)
Gene ID: k141_40706_30
Type: CAZyme
Location: 35583 - 37349 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_40706_23 omnivore > vegetarian 1.88832 0.04715

🧭 Explore Read Mapping of CGC

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