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Cluster: DM127_bin.22_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_352454 k141_352454_13 16588 18567 - GH120
NULL(UNKNOWN) k141_352454 k141_352454_14 18628 20868 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_352454 k141_352454_15 21119 23482 - GH2
TC k141_352454 k141_352454_16 23591 25303 - 8.A.46.1.6
TC k141_352454 k141_352454_17 25324 28386 - 1.B.14.6.1
TF k141_352454 k141_352454_18 28511 32470 - HTH_AraC
TF k141_352454 k141_352454_19 32765 33208 - CSD
TC k141_352454 k141_352454_20 33271 34389 - 1.I.1.1.3
pfam k141_352454 k141_352454_21 34588 34887 - RRM_1
pfam k141_352454 k141_352454_22 35244 36569 + OEP | OEP
TC k141_352454 k141_352454_23 36590 37681 + 8.A.1.1.2
pfam k141_352454 k141_352454_24 37707 39347 + MFS_1
TF k141_352454 k141_352454_25 39383 40249 + HTH_AraC
TC k141_352454 k141_352454_26 40329 41768 - 2.A.21.9.1
pfam k141_352454 k141_352454_27 41788 42915 - KdpD
NULL(UNKNOWN) k141_352454 k141_352454_28 42912 43676 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_352454 k141_352454_29 43676 44251 - 3.A.3.7.2
TC k141_352454 k141_352454_30 44269 46317 - 3.A.3.7.2
TC k141_352454 k141_352454_31 46344 48050 - 3.A.3.7.2
Gene ID: k141_352454_13
Type: CAZyme
Location: 16588 - 18567 (-)
Gene ID: k141_352454_14
Type:
Location: 18628 - 20868 (-)
Gene ID: k141_352454_15
Type: CAZyme
Location: 21119 - 23482 (-)
Gene ID: k141_352454_16
Type: TC
Location: 23591 - 25303 (-)
Gene ID: k141_352454_17
Type: TC
Location: 25324 - 28386 (-)
Gene ID: k141_352454_18
Type: TF
Location: 28511 - 32470 (-)
Gene ID: k141_352454_19
Type: TF
Location: 32765 - 33208 (-)
Gene ID: k141_352454_20
Type: TC
Location: 33271 - 34389 (-)
Gene ID: k141_352454_21
Type: pfam
Location: 34588 - 34887 (-)
Gene ID: k141_352454_22
Type: pfam
Location: 35244 - 36569 (+)
Gene ID: k141_352454_23
Type: TC
Location: 36590 - 37681 (+)
Gene ID: k141_352454_24
Type: pfam
Location: 37707 - 39347 (+)
Gene ID: k141_352454_25
Type: TF
Location: 39383 - 40249 (+)
Gene ID: k141_352454_26
Type: TC
Location: 40329 - 41768 (-)
Gene ID: k141_352454_27
Type: pfam
Location: 41788 - 42915 (-)
Gene ID: k141_352454_28
Type:
Location: 42912 - 43676 (-)
Gene ID: k141_352454_29
Type: TC
Location: 43676 - 44251 (-)
Gene ID: k141_352454_30
Type: TC
Location: 44269 - 46317 (-)
Gene ID: k141_352454_31
Type: TC
Location: 46344 - 48050 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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