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Cluster: DM127_bin.22_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_107735 k141_107735_53 46888 49011 + GH43_35
pfam k141_107735 k141_107735_54 49222 49752 + Sua5_yciO_yrdC
TC k141_107735 k141_107735_55 49758 51548 + 2.A.49.6.1
pfam k141_107735 k141_107735_56 51562 52530 + Formyl_trans_N | Formyl_trans_C
pfam k141_107735 k141_107735_57 52601 53251 + Ribul_P_3_epim
TC k141_107735 k141_107735_58 53258 55357 + 3.A.11.1.1
pfam k141_107735 k141_107735_59 55459 56496 + DHH | DHHA1
sulfatase k141_107735 k141_107735_60 56605 57621 - S1_16
TC k141_107735 k141_107735_61 57683 58936 - 2.A.1.7.1
Gene ID: k141_107735_53
Type: CAZyme
Location: 46888 - 49011 (+)
Gene ID: k141_107735_54
Type: pfam
Location: 49222 - 49752 (+)
Gene ID: k141_107735_55
Type: TC
Location: 49758 - 51548 (+)
Gene ID: k141_107735_56
Type: pfam
Location: 51562 - 52530 (+)
Gene ID: k141_107735_57
Type: pfam
Location: 52601 - 53251 (+)
Gene ID: k141_107735_58
Type: TC
Location: 53258 - 55357 (+)
Gene ID: k141_107735_59
Type: pfam
Location: 55459 - 56496 (+)
Gene ID: k141_107735_60
Type: sulfatase
Location: 56605 - 57621 (-)
Gene ID: k141_107735_61
Type: TC
Location: 57683 - 58936 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_107735_58 omnivore > vegetarian 2.56986 0.04993

🧭 Explore Read Mapping of CGC

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