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Cluster: DM127_bin.22_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_328569 k141_328569_253 289283 289927 + 3.A.1.12.5
NULL(UNKNOWN) k141_328569 k141_328569_254 289957 291174 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_328569 k141_328569_255 291185 295273 - HTH_AraC
TC k141_328569 k141_328569_256 295721 298786 + 1.B.14.6.1
pfam k141_328569 k141_328569_257 298802 300748 + SusD_RagB | SusD-like_3
CAZyme k141_328569 k141_328569_258 300846 303305 + GH115
CAZyme k141_328569 k141_328569_259 303314 305326 + GH67
CAZyme k141_328569 k141_328569_260 305559 306668 - GH10
CAZyme k141_328569 k141_328569_261 306722 308593 - CE20 | CE20
CAZyme k141_328569 k141_328569_262 309041 310750 + GH35
CAZyme k141_328569 k141_328569_263 310830 312425 + CE20 | CE20
TC k141_328569 k141_328569_264 312471 313967 + 2.A.2.3.4
CAZyme k141_328569 k141_328569_265 314057 315028 + GH43_1
CAZyme k141_328569 k141_328569_266 315108 317117 + GH67
TF k141_328569 k141_328569_267 317398 321492 + HTH_AraC
CAZyme k141_328569 k141_328569_268 321568 324150 - GH115
CAZyme k141_328569 k141_328569_269 324242 327493 - CE6 | GH95
CAZyme k141_328569 k141_328569_270 327518 329959 - CE15 | GH8
CAZyme k141_328569 k141_328569_271 330023 331969 - GH97
TF k141_328569 k141_328569_272 332213 335320 + HTH_AraC
NULL(UNKNOWN) k141_328569 k141_328569_273 335430 335546 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_328569 k141_328569_274 335582 338035 + GH31_4
CAZyme k141_328569 k141_328569_275 338125 340731 - GH2
CAZyme k141_328569 k141_328569_276 340728 342299 - CBM91 | GH43_10
CAZyme k141_328569 k141_328569_277 342343 343497 - CE1
NULL(UNKNOWN) k141_328569 k141_328569_278 343662 343754 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_328569 k141_328569_279 343977 345620 - GH30_8
CAZyme k141_328569 k141_328569_280 345624 347834 - GH10
pfam k141_328569 k141_328569_281 347865 348899 - BT_3987-like_N | DUF5627
pfam k141_328569 k141_328569_282 348936 350684 - SusD_RagB | SusD-like_3
TC k141_328569 k141_328569_283 350711 353530 - 1.B.14.6.1
pfam k141_328569 k141_328569_284 353560 355431 - SusD_RagB | SusD-like_3
TC k141_328569 k141_328569_285 355443 358586 - 1.B.14.6.1
CAZyme k141_328569 k141_328569_286 358859 360592 - CBM91 | GH43_12
Gene ID: k141_328569_253
Type: TC
Location: 289283 - 289927 (+)
Gene ID: k141_328569_254
Type:
Location: 289957 - 291174 (+)
Gene ID: k141_328569_255
Type: TF
Location: 291185 - 295273 (-)
Gene ID: k141_328569_256
Type: TC
Location: 295721 - 298786 (+)
Gene ID: k141_328569_257
Type: pfam
Location: 298802 - 300748 (+)
Gene ID: k141_328569_258
Type: CAZyme
Location: 300846 - 303305 (+)
Gene ID: k141_328569_259
Type: CAZyme
Location: 303314 - 305326 (+)
Gene ID: k141_328569_260
Type: CAZyme
Location: 305559 - 306668 (-)
Gene ID: k141_328569_261
Type: CAZyme
Location: 306722 - 308593 (-)
Gene ID: k141_328569_262
Type: CAZyme
Location: 309041 - 310750 (+)
Gene ID: k141_328569_263
Type: CAZyme
Location: 310830 - 312425 (+)
Gene ID: k141_328569_264
Type: TC
Location: 312471 - 313967 (+)
Gene ID: k141_328569_265
Type: CAZyme
Location: 314057 - 315028 (+)
Gene ID: k141_328569_266
Type: CAZyme
Location: 315108 - 317117 (+)
Gene ID: k141_328569_267
Type: TF
Location: 317398 - 321492 (+)
Gene ID: k141_328569_268
Type: CAZyme
Location: 321568 - 324150 (-)
Gene ID: k141_328569_269
Type: CAZyme
Location: 324242 - 327493 (-)
Gene ID: k141_328569_270
Type: CAZyme
Location: 327518 - 329959 (-)
Gene ID: k141_328569_271
Type: CAZyme
Location: 330023 - 331969 (-)
Gene ID: k141_328569_272
Type: TF
Location: 332213 - 335320 (+)
Gene ID: k141_328569_273
Type:
Location: 335430 - 335546 (+)
Gene ID: k141_328569_274
Type: CAZyme
Location: 335582 - 338035 (+)
Gene ID: k141_328569_275
Type: CAZyme
Location: 338125 - 340731 (-)
Gene ID: k141_328569_276
Type: CAZyme
Location: 340728 - 342299 (-)
Gene ID: k141_328569_277
Type: CAZyme
Location: 342343 - 343497 (-)
Gene ID: k141_328569_278
Type:
Location: 343662 - 343754 (-)
Gene ID: k141_328569_279
Type: CAZyme
Location: 343977 - 345620 (-)
Gene ID: k141_328569_280
Type: CAZyme
Location: 345624 - 347834 (-)
Gene ID: k141_328569_281
Type: pfam
Location: 347865 - 348899 (-)
Gene ID: k141_328569_282
Type: pfam
Location: 348936 - 350684 (-)
Gene ID: k141_328569_283
Type: TC
Location: 350711 - 353530 (-)
Gene ID: k141_328569_284
Type: pfam
Location: 353560 - 355431 (-)
Gene ID: k141_328569_285
Type: TC
Location: 355443 - 358586 (-)
Gene ID: k141_328569_286
Type: CAZyme
Location: 358859 - 360592 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_328569_278 vegan > omnivore 14.59165 0.02726

🧭 Explore Read Mapping of CGC

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