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Cluster: DM127_bin.22_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_31370 k141_31370_7 4071 6116 - GH13_36
pfam k141_31370 k141_31370_8 6218 7699 - SusF_SusE
pfam k141_31370 k141_31370_9 7714 9354 - SusD_RagB | SusD-like_3
TC k141_31370 k141_31370_10 9359 12325 - 1.B.14.6.1
TF k141_31370 k141_31370_11 12826 13833 + LacI
TC k141_31370 k141_31370_12 13873 15243 + 2.A.2.6.2
CAZyme k141_31370 k141_31370_13 15398 17716 + GH65
pfam k141_31370 k141_31370_14 17727 18779 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC k141_31370 k141_31370_15 18787 21819 + 2.A.6.2.37
pfam k141_31370 k141_31370_16 21892 23133 + OEP | OEP
TC k141_31370 k141_31370_17 23225 24460 - 3.B.1.1.2
Gene ID: k141_31370_7
Type: CAZyme
Location: 4071 - 6116 (-)
Gene ID: k141_31370_8
Type: pfam
Location: 6218 - 7699 (-)
Gene ID: k141_31370_9
Type: pfam
Location: 7714 - 9354 (-)
Gene ID: k141_31370_10
Type: TC
Location: 9359 - 12325 (-)
Gene ID: k141_31370_11
Type: TF
Location: 12826 - 13833 (+)
Gene ID: k141_31370_12
Type: TC
Location: 13873 - 15243 (+)
Gene ID: k141_31370_13
Type: CAZyme
Location: 15398 - 17716 (+)
Gene ID: k141_31370_14
Type: pfam
Location: 17727 - 18779 (+)
Gene ID: k141_31370_15
Type: TC
Location: 18787 - 21819 (+)
Gene ID: k141_31370_16
Type: pfam
Location: 21892 - 23133 (+)
Gene ID: k141_31370_17
Type: TC
Location: 23225 - 24460 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_31370_13 omnivore > vegetarian 2.11339 0.04715
k141_31370_16 omnivore > vegetarian 1.97051 0.04715

🧭 Explore Read Mapping of CGC

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