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Cluster: DM118_87_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_20580 k141_20580_1 2 3175 + GH3
pfam k141_20580 k141_20580_2 3252 3743 - Flavodoxin_1
pfam k141_20580 k141_20580_3 3747 4370 - DUF3793
TC k141_20580 k141_20580_4 4480 5547 - 3.A.15.2.1
NULL(UNKNOWN) k141_20580 k141_20580_5 5550 6155 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_20580 k141_20580_6 6152 7921 - 1.B.22.4.1
NULL(UNKNOWN) k141_20580 k141_20580_7 7936 8439 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_20580 k141_20580_8 8456 9685 - 3.A.15.1.1
TC k141_20580 k141_20580_9 9682 11157 - 3.A.15.1.1
Gene ID: k141_20580_1
Type: CAZyme
Location: 2 - 3175 (+)
Gene ID: k141_20580_2
Type: pfam
Location: 3252 - 3743 (-)
Gene ID: k141_20580_3
Type: pfam
Location: 3747 - 4370 (-)
Gene ID: k141_20580_4
Type: TC
Location: 4480 - 5547 (-)
Gene ID: k141_20580_5
Type:
Location: 5550 - 6155 (-)
Gene ID: k141_20580_6
Type: TC
Location: 6152 - 7921 (-)
Gene ID: k141_20580_7
Type:
Location: 7936 - 8439 (-)
Gene ID: k141_20580_8
Type: TC
Location: 8456 - 9685 (-)
Gene ID: k141_20580_9
Type: TC
Location: 9682 - 11157 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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