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Cluster: DM118_87_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_386403 k141_386403_21 22169 22597 + 9.B.18.1.2
pfam k141_386403 k141_386403_22 22603 23373 + ABC2_membrane
TC k141_386403 k141_386403_23 23387 24109 + 3.A.1.103.1
CAZyme k141_386403 k141_386403_24 24156 25781 + GT111 | GT2
NULL(UNKNOWN) k141_386403 k141_386403_25 25785 26210 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_386403 k141_386403_26 26260 28785 + Fer4 | Fer4
CAZyme k141_386403 k141_386403_27 28972 29874 + GT2
CAZyme k141_386403 k141_386403_28 29871 31439 + GT2
NULL(UNKNOWN) k141_386403 k141_386403_29 31436 32197 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_386403 k141_386403_30 32194 33285 + GT4
Gene ID: k141_386403_21
Type: TC
Location: 22169 - 22597 (+)
Gene ID: k141_386403_22
Type: pfam
Location: 22603 - 23373 (+)
Gene ID: k141_386403_23
Type: TC
Location: 23387 - 24109 (+)
Gene ID: k141_386403_24
Type: CAZyme
Location: 24156 - 25781 (+)
Gene ID: k141_386403_25
Type:
Location: 25785 - 26210 (+)
Gene ID: k141_386403_26
Type: STP
Location: 26260 - 28785 (+)
Gene ID: k141_386403_27
Type: CAZyme
Location: 28972 - 29874 (+)
Gene ID: k141_386403_28
Type: CAZyme
Location: 29871 - 31439 (+)
Gene ID: k141_386403_29
Type:
Location: 31436 - 32197 (+)
Gene ID: k141_386403_30
Type: CAZyme
Location: 32194 - 33285 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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