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Cluster: DM111_20_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_217706 k141_217706_31 46812 47603 + GT2
CAZyme k141_217706 k141_217706_32 47584 48711 + GT2
pfam k141_217706 k141_217706_33 48698 49987 + MatE | Polysacc_synt | Polysacc_synt_3
NULL(UNKNOWN) k141_217706 k141_217706_34 50078 51415 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_217706 k141_217706_35 51509 52882 + 9.B.18.1.3
NULL(UNKNOWN) k141_217706 k141_217706_36 52961 54454 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_217706 k141_217706_37 54638 56050 + 9.B.18.1.2
pfam k141_217706 k141_217706_38 56156 56629 + Alg14
CAZyme k141_217706 k141_217706_39 56639 57145 + GT1
CAZyme k141_217706 k141_217706_40 57158 58096 + GT2
CAZyme k141_217706 k141_217706_41 58089 59162 + GT4
NULL(UNKNOWN) k141_217706 k141_217706_42 59178 60443 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_217706 k141_217706_43 60427 61398 + GT8
CAZyme k141_217706 k141_217706_44 61398 62384 + GT2
Gene ID: k141_217706_31
Type: CAZyme
Location: 46812 - 47603 (+)
Gene ID: k141_217706_32
Type: CAZyme
Location: 47584 - 48711 (+)
Gene ID: k141_217706_33
Type: pfam
Location: 48698 - 49987 (+)
Gene ID: k141_217706_34
Type:
Location: 50078 - 51415 (+)
Gene ID: k141_217706_35
Type: TC
Location: 51509 - 52882 (+)
Gene ID: k141_217706_36
Type:
Location: 52961 - 54454 (+)
Gene ID: k141_217706_37
Type: TC
Location: 54638 - 56050 (+)
Gene ID: k141_217706_38
Type: pfam
Location: 56156 - 56629 (+)
Gene ID: k141_217706_39
Type: CAZyme
Location: 56639 - 57145 (+)
Gene ID: k141_217706_40
Type: CAZyme
Location: 57158 - 58096 (+)
Gene ID: k141_217706_41
Type: CAZyme
Location: 58089 - 59162 (+)
Gene ID: k141_217706_42
Type:
Location: 59178 - 60443 (+)
Gene ID: k141_217706_43
Type: CAZyme
Location: 60427 - 61398 (+)
Gene ID: k141_217706_44
Type: CAZyme
Location: 61398 - 62384 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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