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Cluster: DM111_20_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_376965 k141_376965_78 92206 93804 + 2.A.50.2.1
pfam k141_376965 k141_376965_79 93817 95094 + DHHW | DHHW
pfam k141_376965 k141_376965_80 95321 96244 + Lipase_GDSL_2
TC k141_376965 k141_376965_81 96328 97185 - 3.A.1.1.36
TC k141_376965 k141_376965_82 97198 98109 - 3.A.1.1.4
NULL(UNKNOWN) k141_376965 k141_376965_83 98277 99704 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_376965 k141_376965_84 99771 100790 - LacI
CAZyme k141_376965 k141_376965_85 101189 103624 + GH94
TC k141_376965 k141_376965_86 103966 105321 - 2.A.66.1.33
pfam k141_376965 k141_376965_87 105436 107082 - ILVD_EDD_N | ILV_EDD_C
TC k141_376965 k141_376965_88 107234 108499 - 2.A.56.1.4
pfam k141_376965 k141_376965_89 108499 109002 - DctQ
TC k141_376965 k141_376965_90 109147 110301 - 2.A.56.1.2
pfam k141_376965 k141_376965_91 110972 111907 + Semialdhyde_dh | Semialdhyde_dhC_1
pfam k141_376965 k141_376965_92 112002 113153 - DUF2232
TC k141_376965 k141_376965_93 113300 113977 + 9.B.143.2.2
Gene ID: k141_376965_78
Type: TC
Location: 92206 - 93804 (+)
Gene ID: k141_376965_79
Type: pfam
Location: 93817 - 95094 (+)
Gene ID: k141_376965_80
Type: pfam
Location: 95321 - 96244 (+)
Gene ID: k141_376965_81
Type: TC
Location: 96328 - 97185 (-)
Gene ID: k141_376965_82
Type: TC
Location: 97198 - 98109 (-)
Gene ID: k141_376965_83
Type:
Location: 98277 - 99704 (-)
Gene ID: k141_376965_84
Type: TF
Location: 99771 - 100790 (-)
Gene ID: k141_376965_85
Type: CAZyme
Location: 101189 - 103624 (+)
Gene ID: k141_376965_86
Type: TC
Location: 103966 - 105321 (-)
Gene ID: k141_376965_87
Type: pfam
Location: 105436 - 107082 (-)
Gene ID: k141_376965_88
Type: TC
Location: 107234 - 108499 (-)
Gene ID: k141_376965_89
Type: pfam
Location: 108499 - 109002 (-)
Gene ID: k141_376965_90
Type: TC
Location: 109147 - 110301 (-)
Gene ID: k141_376965_91
Type: pfam
Location: 110972 - 111907 (+)
Gene ID: k141_376965_92
Type: pfam
Location: 112002 - 113153 (-)
Gene ID: k141_376965_93
Type: TC
Location: 113300 - 113977 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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