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Cluster: DM111_20_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_115424 k141_115424_2 1520 2716 - CE8 | CE8
CAZyme k141_115424 k141_115424_3 3046 4620 + GH28
TC k141_115424 k141_115424_4 4696 6069 + 3.A.1.1.11
TC k141_115424 k141_115424_5 6265 7173 + 3.A.1.1.11
TC k141_115424 k141_115424_6 7176 8033 + 3.A.1.1.11
CAZyme k141_115424 k141_115424_7 8037 9203 + GH105
TF k141_115424 k141_115424_8 9259 10218 + HTH_AraC | HTH_AraC
pfam k141_115424 k141_115424_9 10215 11072 + AP_endonuc_2
TC k141_115424 k141_115424_10 11276 12616 + 9.A.40.2.2
Gene ID: k141_115424_2
Type: CAZyme
Location: 1520 - 2716 (-)
Gene ID: k141_115424_3
Type: CAZyme
Location: 3046 - 4620 (+)
Gene ID: k141_115424_4
Type: TC
Location: 4696 - 6069 (+)
Gene ID: k141_115424_5
Type: TC
Location: 6265 - 7173 (+)
Gene ID: k141_115424_6
Type: TC
Location: 7176 - 8033 (+)
Gene ID: k141_115424_7
Type: CAZyme
Location: 8037 - 9203 (+)
Gene ID: k141_115424_8
Type: TF
Location: 9259 - 10218 (+)
Gene ID: k141_115424_9
Type: pfam
Location: 10215 - 11072 (+)
Gene ID: k141_115424_10
Type: TC
Location: 11276 - 12616 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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