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Cluster: DM111_20_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_116208 k141_116208_21 25661 26578 - GT2
pfam k141_116208 k141_116208_22 26615 27523 - LicD
pfam k141_116208 k141_116208_23 27561 28256 - Glycos_transf_2
CAZyme k141_116208 k141_116208_24 28222 29142 - GT2 | GT2
TC k141_116208 k141_116208_25 29153 30049 - 9.B.18.1.2
pfam k141_116208 k141_116208_26 30463 31746 - DegT_DnrJ_EryC1
TC k141_116208 k141_116208_27 31858 33807 - 9.B.18.2.1
NULL(UNKNOWN) k141_116208 k141_116208_28 33935 34150 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_116208 k141_116208_29 34251 35003 - 8.A.3.2.2
TC k141_116208 k141_116208_30 35000 35815 - 8.A.3.2.3
Gene ID: k141_116208_21
Type: CAZyme
Location: 25661 - 26578 (-)
Gene ID: k141_116208_22
Type: pfam
Location: 26615 - 27523 (-)
Gene ID: k141_116208_23
Type: pfam
Location: 27561 - 28256 (-)
Gene ID: k141_116208_24
Type: CAZyme
Location: 28222 - 29142 (-)
Gene ID: k141_116208_25
Type: TC
Location: 29153 - 30049 (-)
Gene ID: k141_116208_26
Type: pfam
Location: 30463 - 31746 (-)
Gene ID: k141_116208_27
Type: TC
Location: 31858 - 33807 (-)
Gene ID: k141_116208_28
Type:
Location: 33935 - 34150 (-)
Gene ID: k141_116208_29
Type: TC
Location: 34251 - 35003 (-)
Gene ID: k141_116208_30
Type: TC
Location: 35000 - 35815 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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