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Cluster: DM109_135_sub_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_184211 k141_184211_12 12805 15240 + GH94
pfam k141_184211 k141_184211_13 15374 16729 - MatE | MatE
pfam k141_184211 k141_184211_14 17012 18658 - ILVD_EDD_N | ILV_EDD_C
TC k141_184211 k141_184211_15 18714 19979 - 2.A.56.1.4
pfam k141_184211 k141_184211_16 19979 20482 - DctQ
TC k141_184211 k141_184211_17 20657 21808 - 2.A.56.1.2
pfam k141_184211 k141_184211_18 22451 23386 + Semialdhyde_dh | Semialdhyde_dhC_1
pfam k141_184211 k141_184211_19 23391 24539 - DUF2232
TC k141_184211 k141_184211_20 24807 25484 + 9.B.143.2.2
Gene ID: k141_184211_12
Type: CAZyme
Location: 12805 - 15240 (+)
Gene ID: k141_184211_13
Type: pfam
Location: 15374 - 16729 (-)
Gene ID: k141_184211_14
Type: pfam
Location: 17012 - 18658 (-)
Gene ID: k141_184211_15
Type: TC
Location: 18714 - 19979 (-)
Gene ID: k141_184211_16
Type: pfam
Location: 19979 - 20482 (-)
Gene ID: k141_184211_17
Type: TC
Location: 20657 - 21808 (-)
Gene ID: k141_184211_18
Type: pfam
Location: 22451 - 23386 (+)
Gene ID: k141_184211_19
Type: pfam
Location: 23391 - 24539 (-)
Gene ID: k141_184211_20
Type: TC
Location: 24807 - 25484 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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