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Cluster: DM109_135_sub_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_7000 k141_7000_28 35631 36563 + GT2
TC k141_7000 k141_7000_29 37041 38156 + 3.A.1.2.3
TC k141_7000 k141_7000_30 38262 39770 + 3.A.1.2.3
TC k141_7000 k141_7000_31 39802 40806 + 3.A.1.2.3
NULL(UNKNOWN) k141_7000 k141_7000_32 40975 41373 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_7000 k141_7000_33 41496 43127 + HTH_AraC | HTH_AraC
TC k141_7000 k141_7000_34 43259 45499 + 8.A.59.2.1
STP k141_7000 k141_7000_35 45492 46469 + Peripla_BP_1
TC k141_7000 k141_7000_36 46476 47549 + 3.A.1.2.3
pfam k141_7000 k141_7000_37 47562 48188 - DUF6553
TC k141_7000 k141_7000_38 48315 49871 + 2.A.15.1.4
TC k141_7000 k141_7000_39 50020 50793 + 9.B.28.1.2
pfam k141_7000 k141_7000_40 51169 51837 + Hydrolase | HAD | Hydrolase_like | HAD_2
STP k141_7000 k141_7000_41 52012 53109 + PfkB
TC k141_7000 k141_7000_42 53165 53860 - 2.A.122.1.2
TC k141_7000 k141_7000_43 53857 54432 - 1.E.14.1.15
Gene ID: k141_7000_28
Type: CAZyme
Location: 35631 - 36563 (+)
Gene ID: k141_7000_29
Type: TC
Location: 37041 - 38156 (+)
Gene ID: k141_7000_30
Type: TC
Location: 38262 - 39770 (+)
Gene ID: k141_7000_31
Type: TC
Location: 39802 - 40806 (+)
Gene ID: k141_7000_32
Type:
Location: 40975 - 41373 (+)
Gene ID: k141_7000_33
Type: TF
Location: 41496 - 43127 (+)
Gene ID: k141_7000_34
Type: TC
Location: 43259 - 45499 (+)
Gene ID: k141_7000_35
Type: STP
Location: 45492 - 46469 (+)
Gene ID: k141_7000_36
Type: TC
Location: 46476 - 47549 (+)
Gene ID: k141_7000_37
Type: pfam
Location: 47562 - 48188 (-)
Gene ID: k141_7000_38
Type: TC
Location: 48315 - 49871 (+)
Gene ID: k141_7000_39
Type: TC
Location: 50020 - 50793 (+)
Gene ID: k141_7000_40
Type: pfam
Location: 51169 - 51837 (+)
Gene ID: k141_7000_41
Type: STP
Location: 52012 - 53109 (+)
Gene ID: k141_7000_42
Type: TC
Location: 53165 - 53860 (-)
Gene ID: k141_7000_43
Type: TC
Location: 53857 - 54432 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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