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Cluster: DM108_bin.36_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_37624 k141_37624_1 408 1535 - 2.A.45.2.6
pfam k141_37624 k141_37624_2 1532 2473 - IU_nuc_hydro
CAZyme k141_37624 k141_37624_3 2636 4621 - GH120
CAZyme k141_37624 k141_37624_4 4837 5784 + GH179
TC k141_37624 k141_37624_5 6191 7915 + 1.A.11.2.7
pfam k141_37624 k141_37624_6 8148 9155 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
TC k141_37624 k141_37624_7 9185 10549 - 2.A.66.1.32
TF k141_37624 k141_37624_8 10634 11062 - MarR
CAZyme k141_37624 k141_37624_9 11254 13125 + GH146
CAZyme k141_37624 k141_37624_10 13151 14473 + GH5_13
Gene ID: k141_37624_1
Type: TC
Location: 408 - 1535 (-)
Gene ID: k141_37624_2
Type: pfam
Location: 1532 - 2473 (-)
Gene ID: k141_37624_3
Type: CAZyme
Location: 2636 - 4621 (-)
Gene ID: k141_37624_4
Type: CAZyme
Location: 4837 - 5784 (+)
Gene ID: k141_37624_5
Type: TC
Location: 6191 - 7915 (+)
Gene ID: k141_37624_6
Type: pfam
Location: 8148 - 9155 (+)
Gene ID: k141_37624_7
Type: TC
Location: 9185 - 10549 (-)
Gene ID: k141_37624_8
Type: TF
Location: 10634 - 11062 (-)
Gene ID: k141_37624_9
Type: CAZyme
Location: 11254 - 13125 (+)
Gene ID: k141_37624_10
Type: CAZyme
Location: 13151 - 14473 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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