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Cluster: DM106_bin.18_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_419493 k141_419493_115 86237 87568 - GH13_45
TF k141_419493 k141_419493_116 87727 88479 + HTH_AraC
TF k141_419493 k141_419493_117 88485 88715 - HTH_3
TC k141_419493 k141_419493_118 88879 91050 - 9.A.8.1.5
STP k141_419493 k141_419493_119 91063 91293 - FeoA
CAZyme k141_419493 k141_419493_120 91496 96394 - CE20
NULL(UNKNOWN) k141_419493 k141_419493_121 96671 97222 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_419493 k141_419493_122 97253 98200 - GH110
Gene ID: k141_419493_115
Type: CAZyme
Location: 86237 - 87568 (-)
Gene ID: k141_419493_116
Type: TF
Location: 87727 - 88479 (+)
Gene ID: k141_419493_117
Type: TF
Location: 88485 - 88715 (-)
Gene ID: k141_419493_118
Type: TC
Location: 88879 - 91050 (-)
Gene ID: k141_419493_119
Type: STP
Location: 91063 - 91293 (-)
Gene ID: k141_419493_120
Type: CAZyme
Location: 91496 - 96394 (-)
Gene ID: k141_419493_121
Type:
Location: 96671 - 97222 (-)
Gene ID: k141_419493_122
Type: CAZyme
Location: 97253 - 98200 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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