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Cluster: DM106_bin.18_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_9852 k141_9852_20 28766 29653 - 3.A.1.1.10
TC k141_9852 k141_9852_21 29670 30563 - 3.A.1.1.4
STP k141_9852 k141_9852_22 30579 31988 - SBP_bac_1
TF k141_9852 k141_9852_23 32339 34606 + HTH_AraC | HTH_AraC
CAZyme k141_9852 k141_9852_24 34844 37216 - GH2
pfam k141_9852 k141_9852_25 37433 40291 - SLH | SLH
CAZyme k141_9852 k141_9852_26 40305 42443 - GH51
pfam k141_9852 k141_9852_27 42484 45222 - SLH | SLH | SLH
TC k141_9852 k141_9852_28 45248 46099 - 3.A.1.1.34
TC k141_9852 k141_9852_29 46111 47049 - 3.A.1.1.34
Gene ID: k141_9852_20
Type: TC
Location: 28766 - 29653 (-)
Gene ID: k141_9852_21
Type: TC
Location: 29670 - 30563 (-)
Gene ID: k141_9852_22
Type: STP
Location: 30579 - 31988 (-)
Gene ID: k141_9852_23
Type: TF
Location: 32339 - 34606 (+)
Gene ID: k141_9852_24
Type: CAZyme
Location: 34844 - 37216 (-)
Gene ID: k141_9852_25
Type: pfam
Location: 37433 - 40291 (-)
Gene ID: k141_9852_26
Type: CAZyme
Location: 40305 - 42443 (-)
Gene ID: k141_9852_27
Type: pfam
Location: 42484 - 45222 (-)
Gene ID: k141_9852_28
Type: TC
Location: 45248 - 46099 (-)
Gene ID: k141_9852_29
Type: TC
Location: 46111 - 47049 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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