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Cluster: DM106_bin.18_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_23446 k141_23446_7 5840 7564 - 8.A.59.2.1
STP k141_23446 k141_23446_8 7579 8916 - SBP_bac_1
TC k141_23446 k141_23446_9 9095 10093 + 3.A.1.1.29
TC k141_23446 k141_23446_10 10128 11030 + 3.A.1.1.29
TC k141_23446 k141_23446_11 11064 12503 + 3.A.1.1.9
pfam k141_23446 k141_23446_12 12674 16615 + SLH | SLH | SLH
NULL(UNKNOWN) k141_23446 k141_23446_13 16602 19112 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_23446 k141_23446_14 19127 22399 + GH148
NULL(UNKNOWN) k141_23446 k141_23446_15 22423 24180 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_23446 k141_23446_16 24382 26511 + GH148
Gene ID: k141_23446_7
Type: TC
Location: 5840 - 7564 (-)
Gene ID: k141_23446_8
Type: STP
Location: 7579 - 8916 (-)
Gene ID: k141_23446_9
Type: TC
Location: 9095 - 10093 (+)
Gene ID: k141_23446_10
Type: TC
Location: 10128 - 11030 (+)
Gene ID: k141_23446_11
Type: TC
Location: 11064 - 12503 (+)
Gene ID: k141_23446_12
Type: pfam
Location: 12674 - 16615 (+)
Gene ID: k141_23446_13
Type:
Location: 16602 - 19112 (+)
Gene ID: k141_23446_14
Type: CAZyme
Location: 19127 - 22399 (+)
Gene ID: k141_23446_15
Type:
Location: 22423 - 24180 (+)
Gene ID: k141_23446_16
Type: CAZyme
Location: 24382 - 26511 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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