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Cluster: DM106_bin.18_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_414191 k141_414191_4 3434 6091 + GH38
CAZyme k141_414191 k141_414191_5 6114 8687 + GH2
CAZyme k141_414191 k141_414191_6 8848 11631 + CBM9 | GH28
CAZyme k141_414191 k141_414191_7 11646 14903 + GH28
TF k141_414191 k141_414191_8 14934 16175 + HTH_AraC | HTH_AraC
TC k141_414191 k141_414191_9 16264 18879 + 8.A.59.2.1
STP k141_414191 k141_414191_10 18963 20321 + SBP_bac_1
TC k141_414191 k141_414191_11 20305 21264 + 3.A.1.1.11
TC k141_414191 k141_414191_12 21277 22089 + 3.A.1.1.11
Gene ID: k141_414191_4
Type: CAZyme
Location: 3434 - 6091 (+)
Gene ID: k141_414191_5
Type: CAZyme
Location: 6114 - 8687 (+)
Gene ID: k141_414191_6
Type: CAZyme
Location: 8848 - 11631 (+)
Gene ID: k141_414191_7
Type: CAZyme
Location: 11646 - 14903 (+)
Gene ID: k141_414191_8
Type: TF
Location: 14934 - 16175 (+)
Gene ID: k141_414191_9
Type: TC
Location: 16264 - 18879 (+)
Gene ID: k141_414191_10
Type: STP
Location: 18963 - 20321 (+)
Gene ID: k141_414191_11
Type: TC
Location: 20305 - 21264 (+)
Gene ID: k141_414191_12
Type: TC
Location: 21277 - 22089 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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