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Cluster: DM093_56_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_276142 k141_276142_194 201272 202666 - 2.A.66.1.34
pfam k141_276142 k141_276142_195 203030 203590 + EFP | EFP_N | Elong-fact-P_C
NULL(UNKNOWN) k141_276142 k141_276142_196 203613 204044 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_276142 k141_276142_197 204090 204659 - 2.A.51.1.6
TC k141_276142 k141_276142_198 204656 205285 - 2.A.51.1.6
pfam k141_276142 k141_276142_199 205301 207877 - Wzy_C | NTP_transf_5
CAZyme k141_276142 k141_276142_200 207874 208992 - GT4
Gene ID: k141_276142_194
Type: TC
Location: 201272 - 202666 (-)
Gene ID: k141_276142_195
Type: pfam
Location: 203030 - 203590 (+)
Gene ID: k141_276142_196
Type:
Location: 203613 - 204044 (+)
Gene ID: k141_276142_197
Type: TC
Location: 204090 - 204659 (-)
Gene ID: k141_276142_198
Type: TC
Location: 204656 - 205285 (-)
Gene ID: k141_276142_199
Type: pfam
Location: 205301 - 207877 (-)
Gene ID: k141_276142_200
Type: CAZyme
Location: 207874 - 208992 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
Firm-07
→
Species
Firm-07 sp905187695

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_276142_195 vegetarian > vegan 1.00725 0.00863

🧭 Explore Read Mapping of CGC

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