Cluster: DM093_56_CGC1
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate: alpha-glucan
- Genome ID: DM093_56
- CGC Family ID: CGCFAM_00004
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_78226 | k141_78226_5 | 3710 | 5605 | - | GH13_39 |
| CAZyme | k141_78226 | k141_78226_6 | 5602 | 8043 | - | GT35 |
| CAZyme | k141_78226 | k141_78226_7 | 8043 | 9488 | - | GT5 |
| pfam | k141_78226 | k141_78226_8 | 9499 | 10632 | - | NTP_transferase | Hexapep_GlmU |
| pfam | k141_78226 | k141_78226_9 | 10648 | 11829 | - | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| CAZyme | k141_78226 | k141_78226_10 | 11877 | 13832 | - | CBM48 | GH13_9 |
| pfam | k141_78226 | k141_78226_11 | 14620 | 16122 | + | GalP_UDP_transf | GalP_UDP_tr_C |
| TC | k141_78226 | k141_78226_12 | 16178 | 17470 | - | 2.A.45.1.1 |
| pfam | k141_78226 | k141_78226_13 | 17582 | 18148 | - | Amidase_6 |
| CAZyme | k141_78226 | k141_78226_14 | 18283 | 19713 | - | GT2 |
| pfam | k141_78226 | k141_78226_15 | 19732 | 20541 | - | TMEM164 |
| CAZyme | k141_78226 | k141_78226_16 | 20543 | 21493 | - | GT2 |
Gene ID: k141_78226_5
Type: CAZyme
Location: 3710 - 5605 (-)
Type: CAZyme
Location: 3710 - 5605 (-)
Gene ID: k141_78226_6
Type: CAZyme
Location: 5602 - 8043 (-)
Type: CAZyme
Location: 5602 - 8043 (-)
Gene ID: k141_78226_7
Type: CAZyme
Location: 8043 - 9488 (-)
Type: CAZyme
Location: 8043 - 9488 (-)
Gene ID: k141_78226_8
Type: pfam
Location: 9499 - 10632 (-)
Type: pfam
Location: 9499 - 10632 (-)
Gene ID: k141_78226_9
Type: pfam
Location: 10648 - 11829 (-)
Type: pfam
Location: 10648 - 11829 (-)
Gene ID: k141_78226_10
Type: CAZyme
Location: 11877 - 13832 (-)
Type: CAZyme
Location: 11877 - 13832 (-)
Gene ID: k141_78226_11
Type: pfam
Location: 14620 - 16122 (+)
Type: pfam
Location: 14620 - 16122 (+)
Gene ID: k141_78226_12
Type: TC
Location: 16178 - 17470 (-)
Type: TC
Location: 16178 - 17470 (-)
Gene ID: k141_78226_13
Type: pfam
Location: 17582 - 18148 (-)
Type: pfam
Location: 17582 - 18148 (-)
Gene ID: k141_78226_14
Type: CAZyme
Location: 18283 - 19713 (-)
Type: CAZyme
Location: 18283 - 19713 (-)
Gene ID: k141_78226_15
Type: pfam
Location: 19732 - 20541 (-)
Type: pfam
Location: 19732 - 20541 (-)
Gene ID: k141_78226_16
Type: CAZyme
Location: 20543 - 21493 (-)
Type: CAZyme
Location: 20543 - 21493 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Firm-07
Species
Firm-07 sp905187695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.