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Cluster: DM091_78_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_53006 k141_53006_36 33600 35339 + 1.B.20.1.3
NULL(UNKNOWN) k141_53006 k141_53006_37 35336 36454 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_53006 k141_53006_38 36590 37303 + 9.B.18.1.2
NULL(UNKNOWN) k141_53006 k141_53006_39 37307 37711 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_53006 k141_53006_40 37820 38935 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_53006 k141_53006_41 38925 39926 - GT4
pfam k141_53006 k141_53006_42 39936 40382 - Hexapep | Hexapep_2
CAZyme k141_53006 k141_53006_43 40379 41467 - GT4
pfam k141_53006 k141_53006_44 41457 42737 - Polysacc_synt | Polysacc_synt_3
pfam k141_53006 k141_53006_45 42700 44043 - Wzy_C
CAZyme k141_53006 k141_53006_46 44033 44797 - GT26
Gene ID: k141_53006_36
Type: TC
Location: 33600 - 35339 (+)
Gene ID: k141_53006_37
Type:
Location: 35336 - 36454 (-)
Gene ID: k141_53006_38
Type: TC
Location: 36590 - 37303 (+)
Gene ID: k141_53006_39
Type:
Location: 37307 - 37711 (-)
Gene ID: k141_53006_40
Type:
Location: 37820 - 38935 (-)
Gene ID: k141_53006_41
Type: CAZyme
Location: 38925 - 39926 (-)
Gene ID: k141_53006_42
Type: pfam
Location: 39936 - 40382 (-)
Gene ID: k141_53006_43
Type: CAZyme
Location: 40379 - 41467 (-)
Gene ID: k141_53006_44
Type: pfam
Location: 41457 - 42737 (-)
Gene ID: k141_53006_45
Type: pfam
Location: 42700 - 44043 (-)
Gene ID: k141_53006_46
Type: CAZyme
Location: 44033 - 44797 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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