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Cluster: DM089_74_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_361768 k141_361768_1 2 1120 + 3.A.16.1.1
TF k141_361768 k141_361768_2 1319 2107 - HTH_AraC | HTH_AraC
CAZyme k141_361768 k141_361768_3 2267 3937 - GH123
TF k141_361768 k141_361768_4 4035 4901 + HTH_AraC
TC k141_361768 k141_361768_5 5137 6126 - 8.A.5.1.6
STP k141_361768 k141_361768_6 6132 7115 - Peripla_BP_1
TC k141_361768 k141_361768_7 7112 8848 - 8.A.59.2.1
TF k141_361768 k141_361768_8 8859 10457 - HTH_AraC
pfam k141_361768 k141_361768_9 10713 11063 - Flg_new
TC k141_361768 k141_361768_10 11292 12377 - 3.A.1.2.3
TC k141_361768 k141_361768_11 12393 13913 - 3.A.1.2.3
TC k141_361768 k141_361768_12 13989 15059 - 3.A.1.2.3
Gene ID: k141_361768_1
Type: TC
Location: 2 - 1120 (+)
Gene ID: k141_361768_2
Type: TF
Location: 1319 - 2107 (-)
Gene ID: k141_361768_3
Type: CAZyme
Location: 2267 - 3937 (-)
Gene ID: k141_361768_4
Type: TF
Location: 4035 - 4901 (+)
Gene ID: k141_361768_5
Type: TC
Location: 5137 - 6126 (-)
Gene ID: k141_361768_6
Type: STP
Location: 6132 - 7115 (-)
Gene ID: k141_361768_7
Type: TC
Location: 7112 - 8848 (-)
Gene ID: k141_361768_8
Type: TF
Location: 8859 - 10457 (-)
Gene ID: k141_361768_9
Type: pfam
Location: 10713 - 11063 (-)
Gene ID: k141_361768_10
Type: TC
Location: 11292 - 12377 (-)
Gene ID: k141_361768_11
Type: TC
Location: 12393 - 13913 (-)
Gene ID: k141_361768_12
Type: TC
Location: 13989 - 15059 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS1865
→
Species
UMGS1865 sp900768535

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_361768_3 vegan > omnivore 2.20370 0.02517
k141_361768_3 vegetarian > omnivore 1.08950 0.04220
k141_361768_10 vegetarian > omnivore 1.01489 0.02695

🧭 Explore Read Mapping of CGC

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