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Cluster: DM081_92_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_210883 k141_210883_3 4243 6555 + GH3
pfam k141_210883 k141_210883_4 6830 7915 + ABC_sub_bind
TC k141_210883 k141_210883_5 8005 8973 + 3.A.1.34.1
TC k141_210883 k141_210883_6 8974 9768 + 3.A.1.34.1
TF k141_210883 k141_210883_7 9833 10615 - HTH_AraC | HTH_AraC
CAZyme k141_210883 k141_210883_8 10831 14934 + CBM4 | CBM4 | CBM4 | CBM4 | GH16_3
STP k141_210883 k141_210883_9 15023 16636 - CbiA
pfam k141_210883 k141_210883_10 16768 18252 - DUF1846 | DUF1846_C
TC k141_210883 k141_210883_11 18508 20724 + 3.A.16.1.2
Gene ID: k141_210883_3
Type: CAZyme
Location: 4243 - 6555 (+)
Gene ID: k141_210883_4
Type: pfam
Location: 6830 - 7915 (+)
Gene ID: k141_210883_5
Type: TC
Location: 8005 - 8973 (+)
Gene ID: k141_210883_6
Type: TC
Location: 8974 - 9768 (+)
Gene ID: k141_210883_7
Type: TF
Location: 9833 - 10615 (-)
Gene ID: k141_210883_8
Type: CAZyme
Location: 10831 - 14934 (+)
Gene ID: k141_210883_9
Type: STP
Location: 15023 - 16636 (-)
Gene ID: k141_210883_10
Type: pfam
Location: 16768 - 18252 (-)
Gene ID: k141_210883_11
Type: TC
Location: 18508 - 20724 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_210883_3 vegetarian > omnivore 1.12668 0.04160

🧭 Explore Read Mapping of CGC

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