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Cluster: DM081_92_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_82162 k141_82162_44 51980 53881 + 3.A.3.6.10
TC k141_82162 k141_82162_45 54096 56687 + 3.A.9.1.2
pfam k141_82162 k141_82162_46 56843 57034 + DUF4250
pfam k141_82162 k141_82162_47 57081 58538 + Fer2 | RACo_C_ter | RACo_C_ter | Raco_middle
CAZyme k141_82162 k141_82162_48 58566 60404 + CBM48 | GH13_9
NULL(UNKNOWN) k141_82162 k141_82162_49 60476 61885 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_82162 k141_82162_50 61882 62766 + DUF4130
CAZyme k141_82162 k141_82162_51 62778 63458 + CE4
Gene ID: k141_82162_44
Type: TC
Location: 51980 - 53881 (+)
Gene ID: k141_82162_45
Type: TC
Location: 54096 - 56687 (+)
Gene ID: k141_82162_46
Type: pfam
Location: 56843 - 57034 (+)
Gene ID: k141_82162_47
Type: pfam
Location: 57081 - 58538 (+)
Gene ID: k141_82162_48
Type: CAZyme
Location: 58566 - 60404 (+)
Gene ID: k141_82162_49
Type:
Location: 60476 - 61885 (+)
Gene ID: k141_82162_50
Type: pfam
Location: 61882 - 62766 (+)
Gene ID: k141_82162_51
Type: CAZyme
Location: 62778 - 63458 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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